Anti-α-Synuclein antibody ValidAbTM
(HB6378)
Product overview
| Name | Anti-α-Synuclein antibody ValidAbTM |
| Host | Mouse |
| Clonality | Monoclonal |
| Clonality2 | Monoclonal |
| Target | α-Synuclein |
| Description | Antibody to Alpha-Synuclein - synaptic protein involved in neurodegeneration. Part of the ValidAb™ range of highly validated, data-rich antibodies. |
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Validation data
Figure 1. α-Synuclein staining in rat cerebellum localises to the molecular layer.
Rat cerebellum stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:2000 dilution, 0.5µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse Janelia Fluor 549, HB8556 and goat anti-rabbit DyLight 650, Thermofisher 11804574). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured as a tilescan using a 10x objective (A4: 30ms, Y3: 178, Y5: 247ms exposures) in a z-stack (3.8µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 2. α-Synuclein staining in rat hippocampus.
Rat hippocampus stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:5000 dilution, 0.2µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse DyLight 488 and polyclonal goat anti-rabbit Janelia Fluor 594). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured as a tilescan using a 10x objective (A4: 68ms, L5: 276ms, Y3: 484ms exposures) in a z-stack (5µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 3. α-Synuclein staining in rat dentate gyrus
Rat dentate gyrus stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:5000 dilution, 0.2µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse DyLight 488 and Goat anti-rabbit DyLight 594). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica SP8 AOBS confocal laser scanning microscope attached to a Leica DM I8 inverted epifluorescence microscope. The image was captured in Lightning deconvolution mode using a 63x objective (1.28x zoom), 405nm (10.0% power, PMT: 593V gain), 496nm (5.6% power, Hyd: 35.1% gain) and 561nm (5.5% power, Hyd: 12.7% gain) laser lines in a z-stack (0.37µm spacing). The stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 4. α-Synuclein, NeuN and GFAP staining in rat cerebellum
Rat cerebellum stained with HB6378 for α-synuclein, HB6406 for GFAP and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml), HB6406 (1:2000 dilution) and HB6498 (1:2000 dilution). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal donkey anti-chicken Alexa Fluor 488, Thermofisher A78948; polyclonal goat anti-mouse Janelia Fluor 549; Goat anti-rabbit DyLight 650, Thermofisher 11804574). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica SP8 AOBS confocal laser scanning microscope attached to a Leica DM I8 inverted epifluorescence microscope. The image was captured in Lightning deconvolution mode using a 20x objective (1.28x zoom), 405nm (1% power, PMT: 623V gain), 488nm (2% power, Hyd: 33% gain) and 633nm (1% power, Hyd: 20% gain) laser lines in a z-stack (2.9µm spacing). The stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 5. α-Synuclein staining in mitoDsRed transfected cultured rat hippocampal neurons.
HB6378 staining of rat neurons sparsely transfected with mitoDsRed (please note only some neurons are transfected). Method: neurones were cultured from E17-E18 rat embryos following established protocols (Martin and Henley, 2004. EMBO, 4749–4759) and fixed with 4% PFA on DIV21. Neurons were transfected with a plasmid containing mitoDsRed following established protocols. Cells were permeabilised with 0.1% Triton X-100 followed by blocking in 1% BSA, 300mM glycine. HB6378 was incubated overnight (4°C) at a 1:500 dilution followed by a one hour incubation with a polyclonal goat anti-mouse DyLight 488 conjugated secondary antibody (1:300 dilution). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our ICC protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured Using a 40x objective (DAP: 57ms, L5: 268ms, TX2: 20ms) in a z-stack (1.0µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 6. α-Synuclein staining in rat hippocampal CA1
Rat hippocampus CA1 stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:5000 dilution, 0.2µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse DyLight 488 and Goat anti-rabbit DyLight 594). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured as a tilescan using a 10x objective (A4: 68ms, L5: 276ms, Y3: 484ms exposures) in a z-stack (5µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 7. Concentration response of HB6378 staining in rat cortex and cerebellum.
HB6378 produces strong staining of axon terminals in cortex and cerebellum. Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 15 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 dilutions ranging from 1:1,000 to 1:8,000 (0.125 - 1µg/ml). This was followed by a two hour incubation with a polyclonal goat anti-mouse DyLight 488 secondary antibody at a 1:300 dilution. DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera as a z-stack with a 20x objective before being deconvolved in Huygens professional software and flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
HB6378 produces strong staining of axon terminals in cortex and cerebellum. Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 15 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 dilutions ranging from 1:1,000 to 1:8,000 (0.125 - 1µg/ml). This was followed by a two hour incubation with a polyclonal goat anti-mouse DyLight 488 secondary antibody at a 1:300 dilution. DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera as a z-stack with a 20x objective before being deconvolved in Huygens professional software and flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
For all images DAPI exposure was constant at 20ms, exposure times for alpha synuclein (L5 filter) were as follows:
- 1:1,000: Cerebellum: 175ms; Cortex: 175ms
- 1:2,000: Cerebellum: 175ms; Cortex: 187ms
- 1:4,000: Cerebellum: 252ms; Cortex: 252ms
- 1:8,000: Cerebellum: 252ms, Cortex: 252ms
Figure 8. HB6378 staining in various tissue lysates and preparations
HB6378 revealed the ≈18.5kDa band associated with α-synuclein in neural tissue samples. There was however an unknown cross-reactivity observed in mouse liver samples. Method: mouse brain and rat brain membrane (P2) and cytosol fractions were prepared following previous work (Molnar et al., 1993. Neuroscience 53:307-326) from freshly collected adult brains. Other tissue lysates were prepared following established protocols from freshly dissected tissue (see our guide on WB sample preparation). Samples were loaded (20µg / lane) onto a 4-20% acrylamide gel alongside a protein ladder (NEB Prestained protein standard, P7718S) before being run at 150V for 59 minutes. Wet transfer to a PVDF membrane was completed in 90 minutes using 400mA. The membrane was blocked for 2hrs in 5% non-fat dry milk before being incubated overnight at 4°C in HB6378 at a 1:1,000 dilution (1µg/ml). Following washing, the membrane was incubated in secondary antibody (1:10,000 dilution, Polyclonal goat anti-mouse HRP conjugated, Sigma, A3682) for 2hrs. For more detail please see our Western blotting protocol. Detection was accomplished using Clarity Western ECL substrate (BioRad, 1705061) and a Licor Odyssey Fc imaging system (ECL channel: 6 min exposure, 700nm channel: 30 sec exposure). Following imaging the membrane was stripped with two changes of stripping buffer (HB7756) before being washed, blocked for 2 hours in 5% non-fat dry milk and incubated in HB9177 (mouse monoclonal anti-GAPDH, 1:4,000 dilution, 0.25µg/ml) overnight at 4°C. Following washing the membrane was incubated in a 1:10,000 dilution of a polyclonal goat anti-mouse HRP conjugated secondary antibody (Sigma Aldrich A3682) for 2hrs and visualised again using Clarity Western ECL substrate (BioRad, 1705061) and a Licor Odyssey Fc imaging system (ECL channel: 4 min exposure, 700nm channel: 30 sec exposure).
Figure 9. α-Synuclein staining in rat caudate putamen
Rat striatum stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:2000 dilution, 0.5µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse Janelia Fluor 549 and Goat anti-rabbit DyLight 650, Thermofisher 11804574). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured as a tilescan using a 20x objective (A4: 31ms, Y3: 194ms, Y5: 373ms exposures) in a z-stack (2.4µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 1. α-Synuclein staining in rat cerebellum localises to the molecular layer.
Rat cerebellum stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:2000 dilution, 0.5µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse Janelia Fluor 549, HB8556 and goat anti-rabbit DyLight 650, Thermofisher 11804574). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured as a tilescan using a 10x objective (A4: 30ms, Y3: 178, Y5: 247ms exposures) in a z-stack (3.8µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 2. α-Synuclein staining in rat hippocampus.
Rat hippocampus stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:5000 dilution, 0.2µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse DyLight 488 and polyclonal goat anti-rabbit Janelia Fluor 594). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured as a tilescan using a 10x objective (A4: 68ms, L5: 276ms, Y3: 484ms exposures) in a z-stack (5µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 3. α-Synuclein staining in rat dentate gyrus
Rat dentate gyrus stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:5000 dilution, 0.2µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse DyLight 488 and Goat anti-rabbit DyLight 594). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica SP8 AOBS confocal laser scanning microscope attached to a Leica DM I8 inverted epifluorescence microscope. The image was captured in Lightning deconvolution mode using a 63x objective (1.28x zoom), 405nm (10.0% power, PMT: 593V gain), 496nm (5.6% power, Hyd: 35.1% gain) and 561nm (5.5% power, Hyd: 12.7% gain) laser lines in a z-stack (0.37µm spacing). The stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 4. α-Synuclein, NeuN and GFAP staining in rat cerebellum
Rat cerebellum stained with HB6378 for α-synuclein, HB6406 for GFAP and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml), HB6406 (1:2000 dilution) and HB6498 (1:2000 dilution). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal donkey anti-chicken Alexa Fluor 488, Thermofisher A78948; polyclonal goat anti-mouse Janelia Fluor 549; Goat anti-rabbit DyLight 650, Thermofisher 11804574). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica SP8 AOBS confocal laser scanning microscope attached to a Leica DM I8 inverted epifluorescence microscope. The image was captured in Lightning deconvolution mode using a 20x objective (1.28x zoom), 405nm (1% power, PMT: 623V gain), 488nm (2% power, Hyd: 33% gain) and 633nm (1% power, Hyd: 20% gain) laser lines in a z-stack (2.9µm spacing). The stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 5. α-Synuclein staining in mitoDsRed transfected cultured rat hippocampal neurons.
HB6378 staining of rat neurons sparsely transfected with mitoDsRed (please note only some neurons are transfected). Method: neurones were cultured from E17-E18 rat embryos following established protocols (Martin and Henley, 2004. EMBO, 4749–4759) and fixed with 4% PFA on DIV21. Neurons were transfected with a plasmid containing mitoDsRed following established protocols. Cells were permeabilised with 0.1% Triton X-100 followed by blocking in 1% BSA, 300mM glycine. HB6378 was incubated overnight (4°C) at a 1:500 dilution followed by a one hour incubation with a polyclonal goat anti-mouse DyLight 488 conjugated secondary antibody (1:300 dilution). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our ICC protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured Using a 40x objective (DAP: 57ms, L5: 268ms, TX2: 20ms) in a z-stack (1.0µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 6. α-Synuclein staining in rat hippocampal CA1
Rat hippocampus CA1 stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:5000 dilution, 0.2µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse DyLight 488 and Goat anti-rabbit DyLight 594). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured as a tilescan using a 10x objective (A4: 68ms, L5: 276ms, Y3: 484ms exposures) in a z-stack (5µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Figure 7. Concentration response of HB6378 staining in rat cortex and cerebellum.
HB6378 produces strong staining of axon terminals in cortex and cerebellum. Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 15 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 dilutions ranging from 1:1,000 to 1:8,000 (0.125 - 1µg/ml). This was followed by a two hour incubation with a polyclonal goat anti-mouse DyLight 488 secondary antibody at a 1:300 dilution. DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera as a z-stack with a 20x objective before being deconvolved in Huygens professional software and flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
HB6378 produces strong staining of axon terminals in cortex and cerebellum. Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 15 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 dilutions ranging from 1:1,000 to 1:8,000 (0.125 - 1µg/ml). This was followed by a two hour incubation with a polyclonal goat anti-mouse DyLight 488 secondary antibody at a 1:300 dilution. DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera as a z-stack with a 20x objective before being deconvolved in Huygens professional software and flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
For all images DAPI exposure was constant at 20ms, exposure times for alpha synuclein (L5 filter) were as follows:
- 1:1,000: Cerebellum: 175ms; Cortex: 175ms
- 1:2,000: Cerebellum: 175ms; Cortex: 187ms
- 1:4,000: Cerebellum: 252ms; Cortex: 252ms
- 1:8,000: Cerebellum: 252ms, Cortex: 252ms
Figure 8. HB6378 staining in various tissue lysates and preparations
HB6378 revealed the ≈18.5kDa band associated with α-synuclein in neural tissue samples. There was however an unknown cross-reactivity observed in mouse liver samples. Method: mouse brain and rat brain membrane (P2) and cytosol fractions were prepared following previous work (Molnar et al., 1993. Neuroscience 53:307-326) from freshly collected adult brains. Other tissue lysates were prepared following established protocols from freshly dissected tissue (see our guide on WB sample preparation). Samples were loaded (20µg / lane) onto a 4-20% acrylamide gel alongside a protein ladder (NEB Prestained protein standard, P7718S) before being run at 150V for 59 minutes. Wet transfer to a PVDF membrane was completed in 90 minutes using 400mA. The membrane was blocked for 2hrs in 5% non-fat dry milk before being incubated overnight at 4°C in HB6378 at a 1:1,000 dilution (1µg/ml). Following washing, the membrane was incubated in secondary antibody (1:10,000 dilution, Polyclonal goat anti-mouse HRP conjugated, Sigma, A3682) for 2hrs. For more detail please see our Western blotting protocol. Detection was accomplished using Clarity Western ECL substrate (BioRad, 1705061) and a Licor Odyssey Fc imaging system (ECL channel: 6 min exposure, 700nm channel: 30 sec exposure). Following imaging the membrane was stripped with two changes of stripping buffer (HB7756) before being washed, blocked for 2 hours in 5% non-fat dry milk and incubated in HB9177 (mouse monoclonal anti-GAPDH, 1:4,000 dilution, 0.25µg/ml) overnight at 4°C. Following washing the membrane was incubated in a 1:10,000 dilution of a polyclonal goat anti-mouse HRP conjugated secondary antibody (Sigma Aldrich A3682) for 2hrs and visualised again using Clarity Western ECL substrate (BioRad, 1705061) and a Licor Odyssey Fc imaging system (ECL channel: 4 min exposure, 700nm channel: 30 sec exposure).
Figure 9. α-Synuclein staining in rat caudate putamen
Rat striatum stained with HB6378 for α-synuclein and HB6498 for NeuN (rabbit polyclonal). Method: Rat brains were dissected and fixed overnight in 4% PFA before then being incubated in 30% sucrose (in PBS) until sunk (approx. 48hrs). A freezing microtome was used to cut 40µm horizontal slices before sections were incubated in 1% NaBH4 for 30 minutes. Sections were blocked in 0.05M glycine, 2% BSA and 3% donkey serum before incubation overnight in HB6378 (1:1000 dilution, 1µg/ml) and HB6498 (1:2000 dilution, 0.5µg/ml). This was followed by a two hour incubation with secondary antibodies at a 1:300 dilution (polyclonal goat anti-mouse Janelia Fluor 549 and Goat anti-rabbit DyLight 650, Thermofisher 11804574). DAPI (HB0747) was used at 1µg/ml to visualise cell nuclei. For more detail please see our IHC(IF) protocol. Images were captured using a Leica DMI6000B inverted epifluorescence microscope connected to a Photometric Prime 95B camera. The image was captured as a tilescan using a 20x objective (A4: 31ms, Y3: 194ms, Y5: 373ms exposures) in a z-stack (2.4µm spacing). The image was deconvolved in Huygens professional software before the stack was flattened using a maximum Z projection in ImageJ (Schindelin et al., 2012. Nat Methods, 9(7), 676–682).
Product information
| Immunogen | Human recombinant alpha-synuclein expressed in and purified from E. coli |
| Epitope | Localized to within residues 61 to 95 of human alpha-synuclein |
| Clone number | 2A7 |
| Isotype | IgG1 |
| Purification | Protein A affinity chromatography |
| Concentration | 1mg/ml |
| Formulation | 50% PBS, 50% glycerol + 5mM sodium azide |
| Predicted species reactivity | Mouse, Rat, Human, Pig, Cow |
| Tested species reactivity | Mouse, Rat |
Tested applications
| Applications | ICC, IHC(IF) |
| IHC(IF) optimal concentration | 1µg/ml (1:1,000) as tested in 4% PFA fixed rat brain slices |
| ICC optimal concentration | 1µg/ml (1:1,000) as tested in cultured rat hippocampal neurons |
| Positive control | Any neural tissue will express α-Synuclein in the presynaptic terminals of neurons |
| Negative control | Any non-neural tissue (e.g. liver) or standard cell lines such as HEK293T or HeLa |
| Open data link | Please follow this link to OSF |
Target information
| Other names | aSyn, Non-A beta component of AD amyloid, Non-A4 component of amyloid precursor (NACP) |
| UniProt ID | P37840 |
| Structure image |  |
| Gene name | SNCA |
| NCBI full gene name | synuclein alpha |
| Entrez gene ID |
| Amino acids | 140 (14.5kDa) |
| Isoforms | α-Synuclein has three known isoforms:
|
| Expression | α-Synuclein is highly expressed in the nervous system and is believed to consist of up to 1% of total cytosolic protein in the brain. α-Synuclein is expressed within neurons where it localises to pre-synaptic terminals with much lower levels of cell body expression. Outside of the nervous system, α-Synuclein is also expressed at signifncant levels in erythrocytes and platelets. |
| Subcellular expression | α-Synuclein is a soluble cytosolic protein that predominantly localises to pre-synaptic terminals. Adittionally, more recent evidence has suggested that α-Synuclein also localises to mitochondrial membranes. |
| Processing | α-Synuclein is not subject to processing before reaching an active conformation |
| Post translational modifications | α-Synuclein is subject to phosphorlyation upon multiple residues including on tyrosines 39 and 125 alongside serines 42, 87 and 129. |
| Homology (compared to human) | In a BLAST search using the full protein sequence the following homologues were identified in the following species:
|
| Similar proteins | In a BLAST search using the full protein sequence the only proteins with significant homology to α-Synuclein were:
|
| Epitope homology (between species) | In a BLAST search using the epitope sequence the α-Synuclein homologues from the following species showed the following homologies:
|
| Epitope homology (other proteins) | In a BLAST search using the epitope sequence only α-Synuclein was identified as having significant homology. |
Storage & Handling
| Storage instructions | -20°C |
| Important | This product is for RESEARCH USE ONLY and is not intended for therapeutic or diagnostic use. Not for human or veterinary use |
Technical guides
Western Blot Protocol (1 MB) References for Anti-α-Synuclein antibody ValidAbTM
References are publications that support the biological activity of the product
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Alpha-synuclein in Parkinson's disease and other synucleinopathies: from overt neurodegeneration back to early synaptic dysfunction.
Calabresi P et al (2023) Cell death & disease 14 : 176 -
Modeling Parkinson's Disease With the Alpha-Synuclein Protein.
Gómez-Benito M et al (2020) Frontiers in pharmacology 11 : 356 -
Novel subcellular localization for α-synuclein: possible functional consequences.
Guardia-Laguarta C et al (2015) Frontiers in neuroanatomy 9 : 17 -
α-Synuclein in Parkinson's disease.
Stefanis L (2012) Cold Spring Harbor perspectives in medicine 2 : a009399
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